PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000303328
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family C2H2
Protein Properties Length: 305aa    MW: 30780.9 Da    PI: 8.7808
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000303328genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.0007212234223
                    EETTTT.EEESSHHHHHHHHHHT CS
        zf-C2H2   2 kCpdCg.ksFsrksnLkrHirtH 23 
                    +Cp C+   Fs++  L  H+r+H
  MDP0000303328 212 TCPVCNrSDFSSWKALFGHQRSH 234
                    6*****889*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MTNSKDTTTT TNQGSSAEGQ QPRNENVSSN VTGAAPTTPP STHARTPTPT PPPPHSTGQV  60
NAGGGDGGFL RSSGTPPVRT HLTTGQFNVG GFATGGSSVT PPGPNKGSPG HGSPSPSRGT  120
STPRRGSPSG GRRTPSRGSK SPPSGRGSPS SLGRGSSPAG GNISQIGGSS FTPVRVEISL  180
GGRLAAAGSM AVGGQLGKRK AEVKAPEGMT PTCPVCNRSD FSSWKALFGH QRSHPERPYR  240
GAFPPPGQQQ GEASNAANVR EARDVEEDNE GRGGIDLNMP PPDDDDDDVX DDNRDSGDSG  300
GGAEA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008337944.10.0PREDICTED: serine/arginine repetitive matrix protein 1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102022128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.15e-09C2H2-like zinc finger protein